 | NEPAL
Phylogenetic Networks Parsimony
and Likelihood Toolkit |  |
Thank you for your interest in NEPAL. This software package is
developed and maintained by the BioInformatics
Group at the
Department of
Computer Science at Rice University. PhyloNet is aimed mainly at providing
a suite of tools for reconstructing and analyzing reticulate
(non-treelike) evolutionary relationships using the maximum parsimony
(MP) and maximum likelihood (ML) criteria.
This work is supported in part by a National Science Foundation
grant (CCF-0622037) and a Department of Energy grant (DE-FG02-06ER25734).
NEPAL is developed entirely in C++. To obtain a copy of the tool,
download the most recent version from the link below; currently, we
provide only a linux executable. Usage instructions
can be found in the User Documentation associated with the release downloaded.
NEPAL Version 1.0
- Compressed bundle containing executable and user documentation
(zip)
Check out the PhyloNet tool for
tree comparison-based tools for phylogenetic network reconstruction.